Installing BioConductor and seqinR, Biostrings, and GenomicRanges in R/R Studio on Linux

if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install(version = "3.12")
$ sudo apt-get update
$ sudo apt-get install libblas-dev liblapack-dev libgfortran-8-dev
BiocManager::install(c(“ade4”, “seqinR”, “Biostrings”, “GenomicRanges”))
/usr/bin/ld: cannot find -lgfortran
$ sudo ln -s /usr/lib/x86_64-linux-gnu/libgfortran.so.5 /usr/lib/libgfortran.so

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Malik Naik

Malik Naik

A Graduate student, Full-Stack Developer and open-source contributor.